CDS

Accession Number TCMCG002C18078
gbkey CDS
Protein Id XP_020098951.1
Location 10896867..10898495
Gene LOC109717520
GeneID 109717520
Organism Ananas comosus

Protein

Length 542aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020243362.1
Definition protein ROOT PRIMORDIUM DEFECTIVE 1 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category S
Description Group II intron splicing
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000373        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0015979        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCCAAAACTCCTCTCTCTCCCAAGAACACCATCTCCAACCCCTTTCCCCCTTTTCCTCTCTTACCCAAATTCCTCTTCCATCAATCTCCACAACCCAACCTTATCCTCAAAAACCCATCTTTCACTTTCCCTTACAGCCCCCAAAAAGTCATCTTTTTGGGGAAAAACCCTTCCTTTCCATGGGAAGAAGCCACTGCTCCTCCTGCAGAAGAAGAAAACGCATTTGCCCTTACACCCAGTATCAGCTGTTGTGAAGAGGAGAAAGGAGGCCCCTTTTGATAATGTCATACAAAGGGATAAGAAACTGAAGCTGGTGTTGAAGATTAGGAACATACTTGTGAACCAACCTGATAGGATTATGAGTTTGAGGGAGTTGGGAAGGTATAGAAGAGACCTCGGGCTCACGCGGAAGCGCCGATTCATCGCTTTACTGAAGCGGTTTCCGGCCGTTTTCGATATAGTGGAGGAGGGCGTCTACTCGCTGAAGTTTAGGCTTACGCCCGAGGCGGAGCGGATTTATCTCGAGGAATTGCGGGCGAAGAATGAGATGGAACAGTTGCTGGTCGTGAAGCTGAGGAAGTTGCTGATGATGTCCTTGGATAAGCGAATTCTCATCGAAAAGATTGCCCATTTGAAGACGGATCTCGGTCTCCCTCCCGAGTTTAGGAACACTATATGCGAAAGATACCCTCAATACTTCAAGGTGGTTTCGACCGATCGTGGCCCGGCGTTGGAGTTAACTCACTGGGATCCTGAGCTAGCAATCTCGGCTGCTGAGGTGGCGGCGGAGGAGAATAGGATTAGAGAGATTGAGGAGAGAGATTTGATCATAGATAGGCCTCCTAGATTCAATAGAGTGAAGCTTCCTAGAGGTCTAAATGTCTCCAAGGGAGAAATGAGGAGGATTTTGCAATTCAAGGAAATGCCGTACATATCCCCGTACTCGGACTTCTCCGAGTTGAGGTCAGGTACCCCTCAGAAGGAAAAACATGCTTGCGGGGTCGTTCACGAGATACTTAGCCTTACTCTTGAGAAGAAGACGCTTGTTGATCACCTCACGCATTTTAGGGAAGAGTTTCGGTTCTCGCAGCAGGTGCGAGGAATGCTGATTAGGCACCCTGACATGTTCTACGTGTCTTTGAAAGGCGACAGGGATTCGGTGTTTCTACGCGAGGCTTACAAGGACTCTCAGCTCATTGAGAAGGATAAGTTGTTGCTGTTGAAGGAGAAGCTGCGTGCGCTTGTCGCTGTCCCGCGATTTCGCGGAAGGGGGGCGGGAAAGAGTGATGAAAAGGATAAAGACGGCGAGGCACTGGAAGGACGAGATGGTGAAGAAGATGAAGAAGATGATGGCGAGCATGATGATGATGAGGAATGGTCAGATATCGATGATTCGTTGCTGAATGTCTTGGGAAGCGAATTAGAGAATGTTGATGAGGATTATGATGAAGGAGGTGATTGGAGCGATGATGATGAAAAGGAAGAATCTCCACCACATTTTCATGATGGTGAGAGCATAAGTTTTCAAGAAAGCAAACCGCATAGGAGTAGTGTCTCGAAACCTACTGATGACAAAGTGCTTGTTCCCATGTTTCCGGACGGTAGGCTGAGGGACAGGTGGTGA
Protein:  
MDPKLLSLPRTPSPTPFPLFLSYPNSSSINLHNPTLSSKTHLSLSLTAPKKSSFWGKTLPFHGKKPLLLLQKKKTHLPLHPVSAVVKRRKEAPFDNVIQRDKKLKLVLKIRNILVNQPDRIMSLRELGRYRRDLGLTRKRRFIALLKRFPAVFDIVEEGVYSLKFRLTPEAERIYLEELRAKNEMEQLLVVKLRKLLMMSLDKRILIEKIAHLKTDLGLPPEFRNTICERYPQYFKVVSTDRGPALELTHWDPELAISAAEVAAEENRIREIEERDLIIDRPPRFNRVKLPRGLNVSKGEMRRILQFKEMPYISPYSDFSELRSGTPQKEKHACGVVHEILSLTLEKKTLVDHLTHFREEFRFSQQVRGMLIRHPDMFYVSLKGDRDSVFLREAYKDSQLIEKDKLLLLKEKLRALVAVPRFRGRGAGKSDEKDKDGEALEGRDGEEDEEDDGEHDDDEEWSDIDDSLLNVLGSELENVDEDYDEGGDWSDDDEKEESPPHFHDGESISFQESKPHRSSVSKPTDDKVLVPMFPDGRLRDRW